Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5175

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5174: 13542 - Hypothetical Protein, at 77954 to 78191 13542 mRNA_5175: 13543 - K08341 GABARAP, ATG8, LC3 GABA(A) receptor-associated protein, at 78484 to 79264 13543 mRNA_5176: 13544 - Hypothetical Protein, at 80167 to 80892 13544

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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77,683 - 1.4
77,836 + 1.0
77,995 - 13542 mRNA_5174 0.17 -0.6
78,115 + 13542 mRNA_5174 0.68 0.2
78,260 + 0.3
78,273 + 2.7
78,307 - -1.2
78,385 - 0.9
78,395 + 1.9
78,403 - -1.5
78,408 - -0.8
78,421 + 0.5
78,586 + 13543 mRNA_5175 0.13 0.4
78,720 - 13543 mRNA_5175 0.30 0.4
78,738 + 13543 mRNA_5175 0.33 0.8
78,878 + 13543 mRNA_5175 0.50 1.1
79,166 - 13543 mRNA_5175 0.87 -0.3
79,200 - 0.8
79,314 - 1.2
79,426 - 0.2
79,587 - 0.0
79,703 + 0.2
79,758 + 0.5
79,882 - -1.2
79,999 + -0.4
80,229 + 0.3