Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5098

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5097: 13465 - Hypothetical Protein, at 1745073 to 1746754 13465 mRNA_5098: 13466 - K08065 NFYB nuclear transcription Y subunit beta, at 1747637 to 1748369 13466 mRNA_5099: 13467 - Hypothetical Protein, at 1749217 to 1750028 13467

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,746,987 - 1.3
1,746,989 - -0.5
1,746,996 + -1.4
1,747,019 + 1.1
1,747,023 + -0.0
1,747,079 - 1.5
1,747,109 + 0.4
1,747,137 - 2.3
1,747,137 - 0.2
1,747,139 + 0.3
1,747,144 + 1.0
1,747,150 - -0.0
1,747,162 - 0.0
1,747,163 - 1.0
1,747,165 + 0.1
1,747,166 - 0.1
1,747,168 + 0.7
1,747,180 + 0.9
1,747,181 + -1.4
1,747,192 - 2.1
1,747,221 - 0.6
1,747,221 + 0.5
1,747,237 + -0.3
1,747,286 - -0.5
1,747,307 + 0.4
1,747,308 - -0.1
1,747,309 + 0.2
1,747,317 + -0.4
1,747,318 + 2.2
1,747,327 - -0.5
1,747,327 - -1.1
1,747,333 - 1.0
1,747,476 - 0.5
1,747,865 + 13466 mRNA_5098 0.31 1.0
1,747,926 + 13466 mRNA_5098 0.39 1.2
1,748,335 - 0.4
1,748,345 - 1.4
1,748,346 + 2.4
1,748,372 - 0.5
1,748,375 + 1.1
1,748,463 - 0.5
1,748,479 - 1.7
1,748,480 - 0.8
1,748,480 + -0.2
1,748,489 + 1.4
1,748,489 + -0.2
1,748,522 - 0.6
1,748,575 - 0.8
1,748,639 - -0.5
1,748,644 + 0.1
1,748,668 + 0.2
1,748,676 - 1.0
1,748,681 - 0.3
1,748,686 + 1.9
1,748,686 + 0.2
1,748,687 - 1.5
1,748,688 - 0.6
1,748,693 - -0.5
1,748,694 - 1.1
1,748,700 - -1.2
1,748,701 + 1.1
1,748,706 + 1.2
1,748,744 + -0.1
1,748,744 + 0.4
1,748,760 + 1.5
1,748,786 + -1.3
1,748,788 + 1.1
1,748,791 + -0.1
1,748,792 - 0.7
1,748,806 - 0.4
1,748,823 + 0.5
1,748,827 - 0.1
1,748,830 - 0.6
1,748,837 + 0.3
1,748,846 + 0.7
1,748,854 + -0.8
1,748,855 + 0.1
1,748,858 - -1.0
1,748,861 - -0.2
1,748,862 - -0.2
1,748,863 + 1.2
1,748,863 - -1.7
1,748,893 - -0.7
1,748,922 - 0.3
1,748,929 - 0.2
1,748,991 - 0.5
1,749,000 - 1.0
1,749,001 + -1.4
1,749,028 + -1.8
1,749,051 + 0.2
1,749,095 - 0.4
1,749,098 + 0.5
1,749,115 + -0.5
1,749,124 - 2.6
1,749,124 - 1.4
1,749,145 - 0.6
1,749,146 + 0.5
1,749,271 + -0.1