Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5011

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5010: 13378 - K17576 PPP1R37, LRRC68 protein phosphatase 1 regulatory subunit 37, at 1534443 to 1540178 13378 mRNA_5011: 13379 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 1540350 to 1542527 13379 mRNA_5012: 13380 - K01886 QARS, glnS glutaminyl-tRNA synthetase, at 1542746 to 1545688 13380

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,539,654 - -0.3
1,539,871 + -0.6
1,539,904 - -0.1
1,540,236 - 2.5
1,541,074 + 13379 mRNA_5011 0.33 -1.3
1,541,075 + 13379 mRNA_5011 0.33 0.8
1,541,101 - 13379 mRNA_5011 0.34 -0.6
1,541,111 + 13379 mRNA_5011 0.35 -1.8
1,541,392 + 13379 mRNA_5011 0.48 0.9
1,541,517 - 13379 mRNA_5011 0.54 -1.4
1,541,687 + 13379 mRNA_5011 0.61 -0.5
1,541,813 + 13379 mRNA_5011 0.67 -0.1
1,541,816 - 13379 mRNA_5011 0.67 0.1
1,541,972 + 13379 mRNA_5011 0.74 -0.1
1,542,422 + -0.0
1,542,429 - 0.0
1,542,552 - 0.3
1,542,590 + -1.3
1,542,704 - 0.4
1,542,719 - 2.0