Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4967

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4966: 13334 - Hypothetical Protein, at 1425631 to 1426865 13334 mRNA_4967: 13335 - K11593 ELF2C, AGO eukaryotic translation initiation factor 2C, at 1427740 to 1431350 13335

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,426,780 - -0.3
1,426,833 - -0.3
1,426,970 + -1.3
1,427,110 + 1.7
1,427,110 + 1.6
1,427,118 + 1.5
1,427,247 - -0.1
1,427,251 + -0.3
1,427,252 - 1.4
1,427,293 + 0.5
1,427,294 + -0.5
1,427,399 + 0.4
1,427,414 + 0.4
1,427,627 - -0.9
1,427,668 + 0.4
1,427,679 + 0.2
1,427,695 - 0.3
1,427,703 + 2.1
1,427,706 - 0.4
1,427,839 - 1.0
1,427,840 - -0.3
1,427,848 - -0.3
1,427,861 + 0.9
1,427,867 - -0.1
1,427,959 - 1.4
1,428,121 + 13335 mRNA_4967 0.11 0.8
1,428,123 - 13335 mRNA_4967 0.11 0.8
1,428,144 + 13335 mRNA_4967 0.11 1.6
1,428,729 + 13335 mRNA_4967 0.27 0.5
1,428,874 - 13335 mRNA_4967 0.31 -0.4
1,428,874 + 13335 mRNA_4967 0.31 -1.3
1,428,882 - 13335 mRNA_4967 0.32 -0.0
1,428,914 - 13335 mRNA_4967 0.33 0.1
1,429,033 + 13335 mRNA_4967 0.36 0.3
1,429,453 - 13335 mRNA_4967 0.47 0.5
1,429,458 - 13335 mRNA_4967 0.48 1.6
1,429,472 + 13335 mRNA_4967 0.48 0.9
1,429,891 - 13335 mRNA_4967 0.60 -0.3
1,429,915 + 13335 mRNA_4967 0.60 0.4
1,430,037 - 13335 mRNA_4967 0.64 0.2
1,430,053 - 13335 mRNA_4967 0.64 0.2
1,430,066 - 13335 mRNA_4967 0.64 0.2
1,430,332 + 13335 mRNA_4967 0.72 0.2
1,430,359 + 13335 mRNA_4967 0.73 0.5
1,430,471 - 13335 mRNA_4967 0.76 0.4
1,430,562 + 13335 mRNA_4967 0.78 -0.2
1,430,575 - 13335 mRNA_4967 0.79 -1.4
1,430,752 + 13335 mRNA_4967 0.83 -0.8
1,430,781 - 13335 mRNA_4967 0.84 0.2
1,431,238 + -1.0
1,431,547 - -1.5
1,431,996 + 2.5
1,432,106 + -0.3
1,432,242 - -0.9
1,432,243 + 0.0
1,432,268 + -0.4