Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4946

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4945: 13313 - Hypothetical Protein, at 1376497 to 1378672 13313 mRNA_4946: 13314 - KOG0143 Iron/ascorbate family oxidoreductases, at 1378791 to 1380023 13314 mRNA_4947: 13315 - K12584 DCPS, DCS m7GpppX diphosphatase, at 1380148 to 1381498 13315

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,377,799 + 13313 mRNA_4945 0.60 1.6
1,378,368 + 13313 mRNA_4945 0.86 -1.0
1,378,499 + 1.1
1,378,514 - -0.9
1,378,625 + 0.0
1,378,810 + -0.3
1,378,911 + 0.6
1,379,064 + 13314 mRNA_4946 0.22 -0.8
1,379,369 - 13314 mRNA_4946 0.47 2.2
1,379,384 + 13314 mRNA_4946 0.48 1.0
1,379,503 + 13314 mRNA_4946 0.58 -0.5
1,379,832 - 13314 mRNA_4946 0.84 0.6
1,379,929 - 0.7
1,379,950 + 0.1
1,379,959 + 0.3
1,380,114 + -1.6
1,380,250 - -1.8
1,380,264 + 0.9
1,380,270 + -0.2
1,380,394 - 13315 mRNA_4947 0.18 0.7
1,380,412 - 13315 mRNA_4947 0.20 0.4
1,380,420 - 13315 mRNA_4947 0.20 0.5
1,380,536 - 13315 mRNA_4947 0.29 0.2
1,380,538 + 13315 mRNA_4947 0.29 -0.2
1,380,838 - 13315 mRNA_4947 0.51 0.4
1,380,978 + 13315 mRNA_4947 0.61 0.7