Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4828

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4827: 13195 - Hypothetical Protein, at 1100998 to 1102554 13195 mRNA_4828: 13196 - SUPERFAMILY--SSF52047, at 1102732 to 1104516 13196 mRNA_4829: 13197 - K01298 CPA2 carboxypeptidase A2, at 1104804 to 1106642 13197

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,101,934 - 13195 mRNA_4827 0.60 0.4
1,102,172 + 13195 mRNA_4827 0.75 -0.3
1,102,323 + 13195 mRNA_4827 0.85 -0.0
1,102,437 + -1.4
1,102,454 - 1.4
1,102,488 + -0.7
1,102,588 - 1.7
1,102,612 - 1.2
1,102,644 - 0.5
1,102,791 + 1.0
1,102,875 - 0.3
1,102,879 + -0.6
1,102,881 + 0.2
1,102,895 - 0.6
1,103,076 + 13196 mRNA_4828 0.19 0.1
1,103,450 - 13196 mRNA_4828 0.40 0.1
1,103,452 + 13196 mRNA_4828 0.40 -0.8
1,103,897 - 13196 mRNA_4828 0.65 -1.3
1,103,928 + 13196 mRNA_4828 0.67 1.6
1,104,032 - 13196 mRNA_4828 0.73 2.6
1,104,039 + 13196 mRNA_4828 0.73 -0.4
1,104,083 + 13196 mRNA_4828 0.76 2.3
1,104,354 - 1.4
1,104,366 - -1.1
1,104,516 - -0.3
1,104,680 - 0.9
1,104,825 + 2.3
1,105,345 - 13197 mRNA_4829 0.29 -0.2