Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4810

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4809: 13177 - Hypothetical Protein, at 1063200 to 1067794 13177 mRNA_4810: 13178 - KOG1304 Amino acid transporters, at 1068097 to 1069702 13178

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,067,520 + -0.2
1,067,689 - -0.5
1,067,692 - 2.0
1,067,801 - 0.8
1,067,812 + -0.2
1,067,826 - 0.6
1,067,833 - 0.8
1,067,840 + 1.0
1,067,841 + 1.2
1,067,842 + 0.8
1,067,851 + -0.3
1,067,970 + -0.6
1,068,016 + 0.6
1,068,095 - 0.2
1,068,123 + 0.3
1,068,142 - 1.3
1,068,285 - 13178 mRNA_4810 0.12 -0.3
1,068,294 + 13178 mRNA_4810 0.12 -0.3
1,068,408 - 13178 mRNA_4810 0.19 0.0
1,068,422 + 13178 mRNA_4810 0.20 0.9
1,069,018 + 13178 mRNA_4810 0.57 0.6
1,069,019 - 13178 mRNA_4810 0.57 0.1
1,069,346 + 13178 mRNA_4810 0.78 -0.7
1,069,489 - 13178 mRNA_4810 0.87 1.3
1,069,759 - -0.9
1,069,786 + -0.8
1,069,793 - 0.1
1,069,899 + 1.9
1,069,903 - 1.2
1,069,910 - 0.5
1,070,192 - 0.7
1,070,241 - -0.0
1,070,305 + 2.4
1,070,337 - 0.8
1,070,343 + -1.5
1,070,355 - -1.7
1,070,359 + 0.6
1,070,359 - 0.2
1,070,369 + 1.6
1,070,374 + -0.5
1,070,457 - -0.2
1,070,485 + -0.9
1,070,486 + 1.0
1,070,495 - 2.1
1,070,500 - 1.0
1,070,502 + 2.2
1,070,504 + 0.3
1,070,520 + 0.1
1,070,599 + -0.7
1,070,614 - 0.1
1,070,616 + 1.3
1,070,617 + -1.3
1,070,632 - 0.2
1,070,632 + -1.2
1,070,633 - 0.4
1,070,635 + 0.7
1,070,642 - 0.3
1,070,645 - -0.4
1,070,649 + 0.8
1,070,650 - -0.1
1,070,652 - 0.4
1,070,656 + 1.2
1,070,657 + 1.7
1,070,657 + -0.1
1,070,664 - -0.4
1,070,664 - 1.6
1,070,665 + 2.6
1,070,682 - 0.6
1,070,690 + 0.4
1,070,702 - 0.3