Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4767

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4766: 13134 - BLAST ribonuclease e [Moniliophthora roreri MCA 2997], at 961767 to 963160 13134 mRNA_4767: 13135 - KOG1263 Multicopper oxidases, at 963483 to 966203 13135 mRNA_4768: 13136 - Hypothetical Protein, at 966490 to 969299 13136

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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962,638 + 13134 mRNA_4766 0.62 1.2
962,672 + 13134 mRNA_4766 0.65 -0.3
962,697 - 13134 mRNA_4766 0.67 1.0
962,778 + 13134 mRNA_4766 0.73 0.9
962,798 - 13134 mRNA_4766 0.74 0.1
963,076 - 0.1
963,338 - 1.4
963,369 - 1.7
963,735 - 0.0
963,757 + 13135 mRNA_4767 0.10 0.4
964,145 + 13135 mRNA_4767 0.24 0.1
964,187 - 13135 mRNA_4767 0.26 0.9
964,191 + 13135 mRNA_4767 0.26 -0.2
964,560 + 13135 mRNA_4767 0.40 1.0
964,652 + 13135 mRNA_4767 0.43 0.4
964,719 - 13135 mRNA_4767 0.45 0.2
964,736 - 13135 mRNA_4767 0.46 1.2
964,741 + 13135 mRNA_4767 0.46 -0.2
964,792 - 13135 mRNA_4767 0.48 -0.3
964,839 + 13135 mRNA_4767 0.50 0.1
964,851 + 13135 mRNA_4767 0.50 0.9
964,891 + 13135 mRNA_4767 0.52 -0.0
964,923 - 13135 mRNA_4767 0.53 0.1
965,316 - 13135 mRNA_4767 0.67 -0.0
965,386 - 13135 mRNA_4767 0.70 0.3
965,520 + 13135 mRNA_4767 0.75 -0.7
965,595 - 13135 mRNA_4767 0.78 -1.0
965,611 - 13135 mRNA_4767 0.78 2.0
965,660 + 13135 mRNA_4767 0.80 2.5
965,667 - 13135 mRNA_4767 0.80 1.0
965,667 + 13135 mRNA_4767 0.80 -1.0
965,672 + 13135 mRNA_4767 0.80 0.5
965,785 - 13135 mRNA_4767 0.85 -0.4
965,799 - 13135 mRNA_4767 0.85 1.5
965,800 - 13135 mRNA_4767 0.85 -1.3
965,959 + -0.3
966,111 + 0.2
966,126 + 0.8
966,150 + 0.3
966,190 + -0.9
966,243 - 3.1
966,282 - -0.7
966,296 + 0.2
966,443 + 2.1
966,535 - -0.1
966,540 + -2.5
966,863 - 13136 mRNA_4768 0.13 0.1
967,112 + 13136 mRNA_4768 0.22 0.6
967,121 + 13136 mRNA_4768 0.22 0.0
967,121 + 13136 mRNA_4768 0.22 0.5