Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4672

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4671: 13039 - Hypothetical Protein, at 739616 to 741558 13039 mRNA_4672: 13040 - K11979 UBR7 E3 ubiquitin-protein ligase UBR7, at 742031 to 743506 13040 mRNA_4673: 13041 - K01069 E3.1.2.6, gloB hydroxyacylglutathione hydrolase, at 743886 to 745346 13041

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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741,796 - 0.7
741,822 - 2.0
741,931 + 0.5
741,943 - 0.5
741,962 + 1.7
741,963 - 0.0
742,115 - -1.2
742,123 + -0.0
742,135 + -1.9
742,405 - 13040 mRNA_4672 0.25 0.5
742,544 - 13040 mRNA_4672 0.35 -0.4
742,954 - 13040 mRNA_4672 0.63 -1.2
743,071 + 13040 mRNA_4672 0.70 0.4
743,532 + 0.8
743,809 + -0.8
743,814 - 1.8
743,824 - 0.9
743,993 + 0.7
743,998 + 0.5
744,019 - -0.5
744,278 + 13041 mRNA_4673 0.27 -0.1