Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4588

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4587: 12955 - HMMPfam-Complex1_LYR-like-PF13232, at 531133 to 531604 12955 mRNA_4588: 12956 - HMMPfam-F-box-like-PF12937,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 532507 to 535207 12956 mRNA_4589: 12957 - K14795 RRP36 ribosomal RNA-processing protein 36, at 535476 to 536079 12957

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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531,509 - 12955 mRNA_4587 0.80 -0.2
531,529 - 12955 mRNA_4587 0.84 2.3
531,678 + 0.6
531,821 + 0.5
532,566 - 1.6
533,005 + 12956 mRNA_4588 0.18 1.1
533,005 - 12956 mRNA_4588 0.18 -0.5
533,835 - 12956 mRNA_4588 0.49 0.1
533,854 - 12956 mRNA_4588 0.50 0.5
533,977 - 12956 mRNA_4588 0.54 -0.3
534,181 + 12956 mRNA_4588 0.62 0.5
534,288 + 12956 mRNA_4588 0.66 2.2
534,734 + 12956 mRNA_4588 0.82 -1.3
534,875 + 12956 mRNA_4588 0.88 -0.6