Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4534

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4533: 12901 - Hypothetical Protein, at 398174 to 399920 12901 mRNA_4534: 12902 - K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family, at 400318 to 402345 12902 mRNA_4535: 12903 - Hypothetical Protein, at 402768 to 403548 12903

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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399,440 + 12901 mRNA_4533 0.72 0.5
399,690 + 12901 mRNA_4533 0.87 -0.9
399,849 + 1.7
399,852 + 2.1
399,996 + 0.2
400,010 - 0.9
400,033 - -0.4
400,173 + -0.1
400,783 + 12902 mRNA_4534 0.23 0.7
401,170 - 12902 mRNA_4534 0.42 0.1
401,343 - 12902 mRNA_4534 0.51 0.1
401,611 + 12902 mRNA_4534 0.64 1.3
401,734 - 12902 mRNA_4534 0.70 0.1
402,083 - 12902 mRNA_4534 0.87 1.3
402,088 + 12902 mRNA_4534 0.87 0.7
402,185 - 0.2
402,216 + 0.7
402,337 - 3.5
402,379 - 0.0
402,484 + 0.9
402,487 - 0.3
402,490 + -2.2
402,497 - 0.2
402,506 - 0.8
402,509 - 1.0
402,511 - -0.1
402,517 + 2.2
402,517 + 1.8
402,518 - 0.4
402,519 + -0.6
402,524 - -0.3
402,527 - -1.5
402,529 + -0.3
402,529 + -1.0
402,530 + -0.7
402,530 + 0.1
402,573 - 0.6
402,578 + 2.4
402,602 - 2.3
402,602 + 0.7
402,604 - -0.3
402,609 + 0.1
402,612 + -0.1
402,613 + 0.9
402,629 + -0.4
402,654 + -0.8
402,663 - -0.3
402,665 - 0.7
402,678 - -0.1
402,679 - 0.8
402,679 - -1.0
402,690 + 2.2
402,693 + 0.5
402,706 - -0.2
402,738 - -0.4
402,753 - 0.1
402,877 - 12903 mRNA_4535 0.14 0.1
403,015 - 12903 mRNA_4535 0.32 0.1
403,334 + 12903 mRNA_4535 0.72 0.2