Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4519

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4518: 12886 - Hypothetical Protein, at 369280 to 370567 12886 mRNA_4519: 12887 - Hypothetical Protein, at 371547 to 373000 12887 mRNA_4520: 12888 - Hypothetical Protein, at 373888 to 374415 12888

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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370,870 - 0.1
371,323 + -2.4
371,418 + 1.4
371,990 + 12887 mRNA_4519 0.30 0.3
372,233 - 12887 mRNA_4519 0.47 0.1
372,297 + 12887 mRNA_4519 0.52 0.2
372,315 - 12887 mRNA_4519 0.53 0.4
372,315 - 12887 mRNA_4519 0.53 0.2
372,350 - 12887 mRNA_4519 0.55 -0.6
372,563 - 12887 mRNA_4519 0.70 0.5
372,564 - 12887 mRNA_4519 0.70 1.5
372,604 - 12887 mRNA_4519 0.73 -2.0
372,707 - 12887 mRNA_4519 0.80 0.1
372,708 - 12887 mRNA_4519 0.80 -0.5
372,718 - 12887 mRNA_4519 0.81 0.2
372,721 + 12887 mRNA_4519 0.81 -0.0
372,742 - 12887 mRNA_4519 0.82 -1.7
372,847 + 12887 mRNA_4519 0.89 -0.8
372,871 - 0.5
372,878 - -0.2
372,883 + -2.3
372,895 + 0.2
372,911 - 0.2
372,919 - 1.0
372,920 + -0.1
372,924 + 0.9
372,928 + 0.2
373,045 + 0.9
373,054 + -0.8
373,073 - 1.6
373,082 + 0.5
373,085 - 0.9
373,102 + -0.2
373,185 - -0.5
373,205 - -0.3
373,227 - -1.7
373,255 + 0.3
373,445 - -0.2
373,543 - 0.2
373,569 + 0.6
373,590 + 0.9
373,593 - -0.3
373,601 + 1.0
373,618 - 0.3
373,635 + -0.8
373,695 - 0.4
373,761 - 0.1
373,778 - -0.3
373,813 + 0.6
373,951 + 12888 mRNA_4520 0.12 0.3