Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4418

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4417: 12785 - Hypothetical Protein, at 136437 to 137903 12785 mRNA_4418: 12786 - KOG3683 Uncharacterized conserved protein, at 138075 to 139542 12786 mRNA_4419: 12787 - K11121 SIR2 NAD-dependent histone deacetylase SIR2, at 139865 to 142182 12787

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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137,161 + 12785 mRNA_4417 0.49 0.3
137,185 + 12785 mRNA_4417 0.51 -0.9
137,188 - 12785 mRNA_4417 0.51 -1.3
137,191 + 12785 mRNA_4417 0.51 -0.5
137,312 + 12785 mRNA_4417 0.60 -0.2
137,420 + 12785 mRNA_4417 0.67 0.6
137,610 + 12785 mRNA_4417 0.80 -0.5
137,697 - 12785 mRNA_4417 0.86 0.2
138,161 + 0.5
138,304 + 12786 mRNA_4418 0.16 1.3
138,318 + 12786 mRNA_4418 0.17 -1.0
138,573 + 12786 mRNA_4418 0.34 0.8
138,733 + 12786 mRNA_4418 0.45 -0.7
138,774 + 12786 mRNA_4418 0.48 -0.1
138,821 - 12786 mRNA_4418 0.51 0.7
138,825 + 12786 mRNA_4418 0.51 -0.4
139,579 - 0.8
139,611 + -2.0
139,626 + 0.3
139,751 + -2.6
139,756 + -0.1
139,795 + -1.2
139,896 - 0.3
139,897 - 1.3
139,935 - 2.4
140,060 - -0.4
140,102 + 12787 mRNA_4419 0.10 0.5
140,110 - 12787 mRNA_4419 0.11 -1.4
140,355 + 12787 mRNA_4419 0.21 0.2
140,509 - 12787 mRNA_4419 0.28 1.3