Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4400

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4399: 12767 - HMMPfam-CFEM domain-PF05730, at 93703 to 94660 12767 mRNA_4400: 12768 - Hypothetical Protein, at 95230 to 97148 12768 mRNA_4401: 12769 - KOG3303 Predicted alpha-helical protein, potentially involved in replication/repair, at 97723 to 98507 12769

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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94,273 + 12767 mRNA_4399 0.59 0.1
94,433 - 12767 mRNA_4399 0.76 -0.2
94,445 + 12767 mRNA_4399 0.77 0.8
94,459 - 12767 mRNA_4399 0.79 0.5
94,574 - 0.0
94,604 - 1.2
95,006 + 1.7
95,145 + -0.1
95,163 + 0.6
95,172 + 0.4
95,273 + -0.3
95,468 + 12768 mRNA_4400 0.12 1.1
96,195 + 12768 mRNA_4400 0.50 -0.2
96,718 + 12768 mRNA_4400 0.78 -1.9
96,941 - 12768 mRNA_4400 0.89 0.4
96,965 + -1.1
96,986 - -0.3
97,076 - -0.1
97,135 + 1.4
97,146 + 1.6
97,251 + 0.1
97,337 - 2.9
97,411 + -0.6
97,484 + 1.0
97,513 + -0.3