Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4360

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4359: 12727 - Hypothetical Protein, at 194 to 736 12727 mRNA_4360: 12728 - Hypothetical Protein, at 964 to 3087 12728

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1 + 1.8
34 + 0.5
36 + 1.3
40 + -1.1
106 - -0.8
115 + 0.6
156 - 0.8
162 + 0.2
170 + 0.1
318 + 12727 mRNA_4359 0.23 -0.3
397 + 12727 mRNA_4359 0.37 2.4
440 + 12727 mRNA_4359 0.45 -0.1
450 + 12727 mRNA_4359 0.47 1.8
491 + 12727 mRNA_4359 0.55 -1.2
494 - 12727 mRNA_4359 0.55 -1.1
500 - 12727 mRNA_4359 0.56 0.8
513 + 12727 mRNA_4359 0.59 -0.3
527 - 12727 mRNA_4359 0.61 -0.3
535 + 12727 mRNA_4359 0.63 1.9
537 - 12727 mRNA_4359 0.63 0.4
573 - 12727 mRNA_4359 0.70 0.6
575 - 12727 mRNA_4359 0.70 -0.3
575 - 12727 mRNA_4359 0.70 0.0
585 + 12727 mRNA_4359 0.72 1.5
627 - 12727 mRNA_4359 0.80 0.2
629 + 12727 mRNA_4359 0.80 0.2
632 + 12727 mRNA_4359 0.81 1.6
655 + 12727 mRNA_4359 0.85 -0.9
657 - 12727 mRNA_4359 0.85 0.5
666 + 12727 mRNA_4359 0.87 -0.2
837 + -2.4
866 + -0.4
966 + -0.1
1,080 + -0.1
1,091 + -0.1
1,091 + 0.1
1,092 + -0.8
1,119 + 0.9
1,180 - 12728 mRNA_4360 0.10 0.2
1,185 - 12728 mRNA_4360 0.10 -0.7
1,186 + 12728 mRNA_4360 0.10 0.1
1,262 + 12728 mRNA_4360 0.14 -0.1
1,362 + 12728 mRNA_4360 0.19 -0.5
1,365 - 12728 mRNA_4360 0.19 0.1
1,368 - 12728 mRNA_4360 0.19 -0.2
1,381 + 12728 mRNA_4360 0.20 0.9
1,539 - 12728 mRNA_4360 0.27 1.3
1,589 + 12728 mRNA_4360 0.29 1.0
1,630 + 12728 mRNA_4360 0.31 -0.5
1,688 + 12728 mRNA_4360 0.34 0.5
1,692 + 12728 mRNA_4360 0.34 -0.2
1,698 - 12728 mRNA_4360 0.35 -0.7
1,699 + 12728 mRNA_4360 0.35 0.0
1,763 + 12728 mRNA_4360 0.38 0.0
1,788 + 12728 mRNA_4360 0.39 1.2
1,796 + 12728 mRNA_4360 0.39 0.5
1,867 + 12728 mRNA_4360 0.43 -0.1
2,010 + 12728 mRNA_4360 0.49 -2.4
2,037 + 12728 mRNA_4360 0.51 -0.6
2,077 - 12728 mRNA_4360 0.52 0.4
2,125 + 12728 mRNA_4360 0.55 1.3
2,128 - 12728 mRNA_4360 0.55 -1.8
2,222 + 12728 mRNA_4360 0.59 -0.5
2,224 - 12728 mRNA_4360 0.59 -1.3
2,280 + 12728 mRNA_4360 0.62 -0.3
2,303 + 12728 mRNA_4360 0.63 3.2
2,354 + 12728 mRNA_4360 0.65 0.7
2,357 - 12728 mRNA_4360 0.66 -0.6
2,378 - 12728 mRNA_4360 0.67 1.0
2,396 + 12728 mRNA_4360 0.67 0.1
2,447 - 12728 mRNA_4360 0.70 0.2
2,549 + 12728 mRNA_4360 0.75 0.2
2,681 + 12728 mRNA_4360 0.81 -0.1
2,991 + 0.4
3,097 - -0.2
3,106 + -1.1
3,107 + -2.2
3,152 + 1.5
3,276 + 0.6
3,398 + -0.3
3,399 + 1.2
3,417 + 0.4
3,516 + 0.4
3,568 - -1.6
3,574 - -0.6
3,578 + -0.0
3,632 + -0.4
3,691 + -0.3
3,692 - 1.3
3,695 - 0.1
3,719 - -0.6
3,759 + -0.0
3,775 + 1.9
3,843 - 0.4
3,845 - 0.3
3,845 - -0.1
3,850 + -0.5
3,852 + -1.0
3,859 + -1.9