Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4295

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4294: 12662 - K08851 TP53RK, PRPK, BUD32 TP53 regulating kinase and related kinases, at 1823138 to 1824204 12662 mRNA_4295: 12663 - K15454 PUS9 tRNA pseudouridine synthase 9, at 1824409 to 1826962 12663

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,824,220 + 2.6
1,824,231 - 0.3
1,824,242 - 1.5
1,824,245 - -0.4
1,824,267 + 0.3
1,824,298 - 0.4
1,824,362 + 0.4
1,824,540 + 0.7
1,824,561 + 0.5
1,824,561 - -0.9
1,824,562 - 1.2
1,824,678 + 12663 mRNA_4295 0.11 -0.5
1,824,686 + 12663 mRNA_4295 0.11 -0.7
1,824,859 - 12663 mRNA_4295 0.18 0.8
1,824,860 - 12663 mRNA_4295 0.18 -2.2
1,824,895 - 12663 mRNA_4295 0.19 1.3
1,825,285 + 12663 mRNA_4295 0.34 0.3
1,825,296 + 12663 mRNA_4295 0.35 -0.3
1,825,427 + 12663 mRNA_4295 0.40 -0.1
1,826,280 - 12663 mRNA_4295 0.73 0.6
1,826,312 + 12663 mRNA_4295 0.75 -0.5
1,826,437 + 12663 mRNA_4295 0.79 -0.1
1,826,995 + 0.3
1,827,278 - -0.8
1,827,315 + -0.5
1,827,329 - 1.0
1,827,459 - 0.7
1,827,516 + -0.6
1,827,612 - 3.1
1,827,739 + -0.2
1,827,796 + -0.2
1,827,921 - -0.2
1,827,930 + 0.1