Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4286

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4285: 12653 - K18162 NDUFAF5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 5, at 1803577 to 1805345 12653 mRNA_4286: 12654 - K01288 KEX1 carboxypeptidase D, at 1805438 to 1808326 12654 mRNA_4287: 12655 - K14559 MPP10 U3 small nucleolar RNA-associated protein MPP10, at 1808511 to 1811471 12655

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,805,440 - 1.0
1,805,694 + 0.8
1,805,710 - -0.8
1,805,713 + -0.8
1,805,980 + 12654 mRNA_4286 0.19 0.4
1,806,529 + 12654 mRNA_4286 0.38 -0.5
1,806,784 + 12654 mRNA_4286 0.47 -0.7
1,806,850 + 12654 mRNA_4286 0.49 -0.1
1,806,972 + 12654 mRNA_4286 0.53 1.0
1,807,117 + 12654 mRNA_4286 0.58 -0.2
1,807,347 + 12654 mRNA_4286 0.66 1.2
1,807,351 - 12654 mRNA_4286 0.66 0.0
1,807,711 - 12654 mRNA_4286 0.79 1.4
1,808,050 + 0.8
1,808,274 - 0.2
1,808,274 + -0.4
1,808,282 - -0.1
1,808,289 - -0.9
1,808,299 + 0.4
1,808,303 - 2.4
1,808,318 + 0.4
1,808,326 - 0.4
1,808,436 - 0.3
1,808,436 + 0.8
1,808,438 - 2.7
1,808,445 + 0.5
1,808,447 - -0.1
1,808,455 - 0.6
1,808,457 + 0.2
1,808,602 - 1.6