Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4211

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4210: 12578 - K19985 EXOC6, SEC15 exocyst complex component 6, at 1618796 to 1621938 12578 mRNA_4211: 12579 - Hypothetical Protein, at 1622119 to 1623170 12579 mRNA_4212: 12580 - KOG1968 Replication factor C, subunit RFC1 (large subunit), at 1623456 to 1625668 12580

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,621,157 - 12578 mRNA_4210 0.75 0.0
1,621,162 + 12578 mRNA_4210 0.75 -0.6
1,621,165 - 12578 mRNA_4210 0.75 -0.3
1,621,179 + 12578 mRNA_4210 0.76 0.6
1,621,326 + 12578 mRNA_4210 0.80 -1.1
1,621,614 + 12578 mRNA_4210 0.90 -0.4
1,621,690 - 1.9
1,621,709 - -0.7
1,621,806 + -0.9
1,622,022 - 0.8
1,622,028 + -1.0
1,622,829 - 12579 mRNA_4211 0.67 0.0
1,622,830 + 12579 mRNA_4211 0.68 -0.8
1,623,165 + 1.2
1,623,258 - -0.8
1,623,386 + -0.9
1,623,442 + 0.4
1,623,491 - 1.2
1,623,648 - 0.5
1,624,117 + 12580 mRNA_4212 0.30 -1.0
1,624,127 - 12580 mRNA_4212 0.30 -0.1