Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4148

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4147: 12515 - HMMPfam-NAD(P)-binding Rossmann-like domain-PF13450,PRINTS-Adrenodoxin reductase family signature-PR00419,SUPERFAMILY--SSF51905, at 1466174 to 1468597 12515 mRNA_4148: 12516 - K00685 ATE1, ate1 arginine-tRNA-protein transferase, at 1468792 to 1470729 12516 mRNA_4149: 12517 - Hypothetical Protein, at 1471142 to 1472834 12517

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,467,920 - 12515 mRNA_4147 0.72 -3.2
1,468,304 - 12515 mRNA_4147 0.88 -0.1
1,468,658 + 0.4
1,468,699 + -0.2
1,469,073 + 12516 mRNA_4148 0.14 1.3
1,469,093 + 12516 mRNA_4148 0.16 0.6
1,469,381 - 12516 mRNA_4148 0.30 0.2
1,470,061 - 12516 mRNA_4148 0.65 1.9
1,470,088 + 12516 mRNA_4148 0.67 1.0
1,470,097 - 12516 mRNA_4148 0.67 0.8
1,470,257 - 12516 mRNA_4148 0.76 -0.1
1,470,363 - 12516 mRNA_4148 0.81 0.8
1,470,398 - 12516 mRNA_4148 0.83 1.2
1,470,423 - 12516 mRNA_4148 0.84 0.7
1,470,524 - 12516 mRNA_4148 0.89 0.8
1,470,681 + -0.4
1,470,778 - 0.0
1,470,784 + -0.9
1,470,939 - -0.7
1,470,985 - 0.2
1,471,111 - -1.3
1,471,729 - 12517 mRNA_4149 0.35 0.7