Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4089

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4088: 12456 - Hypothetical Protein, at 1329492 to 1330466 12456 mRNA_4089: 12457 - Hypothetical Protein, at 1330860 to 1331971 12457 mRNA_4090: 12458 - K18327 REXO4, REX4 RNA exonuclease 4, at 1332147 to 1333809 12458

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,329,873 - 12456 mRNA_4088 0.39 -0.1
1,329,977 + 12456 mRNA_4088 0.50 1.6
1,330,044 + 12456 mRNA_4088 0.57 -0.0
1,330,047 - 12456 mRNA_4088 0.57 -0.3
1,330,161 - 12456 mRNA_4088 0.69 -0.1
1,330,164 + 12456 mRNA_4088 0.69 -0.2
1,330,582 - 2.4
1,330,588 + -0.0
1,331,454 - 12457 mRNA_4089 0.53 0.0
1,331,585 + 12457 mRNA_4089 0.65 0.5
1,331,593 - 12457 mRNA_4089 0.66 1.4
1,331,792 + 12457 mRNA_4089 0.84 -0.2
1,331,847 + 12457 mRNA_4089 0.89 -0.8
1,331,923 - 0.3
1,331,925 + 0.5
1,332,035 + 0.5
1,332,058 + 0.8
1,332,059 + 0.4
1,332,068 + -0.2
1,332,068 + 0.8
1,332,070 - -0.5
1,332,074 + 1.3
1,332,074 - -0.5
1,332,084 + 1.1
1,332,186 + -0.1
1,332,218 + -0.3
1,332,338 - 12458 mRNA_4090 0.11 -0.1