Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4079

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4078: 12446 - K15113 SLC25A28_37, MFRN solute carrier family 25 (mitochondrial iron transporter), member 28/37, at 1304560 to 1305720 12446 mRNA_4079: 12447 - KOG2518 5'-3' exonuclease, at 1305952 to 1309026 12447 mRNA_4080: 12448 - Hypothetical Protein, at 1309088 to 1309498 12448

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,305,262 - 12446 mRNA_4078 0.60 0.7
1,305,722 - -1.0
1,305,860 - 0.1
1,305,879 - 0.6
1,305,898 + -2.3
1,305,907 + 0.8
1,306,029 + 0.2
1,306,035 - 2.1
1,306,041 - -1.1
1,306,045 - -0.9
1,306,070 + -0.9
1,306,158 + -0.1
1,306,168 - -3.2
1,306,181 - -3.0
1,306,182 - -2.8
1,306,186 - -2.3
1,306,324 + 12447 mRNA_4079 0.12 -2.8
1,306,338 - 12447 mRNA_4079 0.13 -2.1
1,306,347 + 12447 mRNA_4079 0.13 -2.1
1,306,352 - 12447 mRNA_4079 0.13 0.3
1,306,354 + 12447 mRNA_4079 0.13 -1.2
1,306,357 + 12447 mRNA_4079 0.13 -2.5
1,306,376 + 12447 mRNA_4079 0.14 -2.4
1,306,484 - 12447 mRNA_4079 0.17 -2.2
1,306,629 + 12447 mRNA_4079 0.22 -1.9
1,306,637 - 12447 mRNA_4079 0.22 -1.4
1,306,648 + 12447 mRNA_4079 0.23 -2.1
1,306,660 + 12447 mRNA_4079 0.23 -0.7
1,306,789 - 12447 mRNA_4079 0.27 -2.8
1,306,789 - 12447 mRNA_4079 0.27 -2.1
1,307,108 + 12447 mRNA_4079 0.38 -2.3
1,307,253 + 12447 mRNA_4079 0.42 -1.0
1,307,264 + 12447 mRNA_4079 0.43 -2.5
1,307,534 + 12447 mRNA_4079 0.51 -1.6
1,307,603 + 12447 mRNA_4079 0.54 -1.3
1,307,779 + 12447 mRNA_4079 0.59 -2.7
1,307,825 - 12447 mRNA_4079 0.61 -2.1
1,307,831 + 12447 mRNA_4079 0.61 -1.7
1,307,948 + 12447 mRNA_4079 0.65 -1.6
1,307,969 - 12447 mRNA_4079 0.66 -2.0
1,308,095 - 12447 mRNA_4079 0.70 -2.4
1,308,112 + 12447 mRNA_4079 0.70 -2.6
1,308,115 + 12447 mRNA_4079 0.70 -1.6
1,308,262 - 12447 mRNA_4079 0.75 -1.1
1,308,374 + 12447 mRNA_4079 0.79 -1.9
1,308,416 - 12447 mRNA_4079 0.80 -1.9
1,308,462 - 12447 mRNA_4079 0.82 -0.5
1,308,531 - 12447 mRNA_4079 0.84 -2.2
1,308,567 - 12447 mRNA_4079 0.85 -2.4
1,308,696 - 12447 mRNA_4079 0.89 -1.6
1,308,983 - -2.4
1,309,279 + 12448 mRNA_4080 0.46 1.1
1,309,422 - 12448 mRNA_4080 0.81 -1.1
1,309,852 - 0.6
1,309,858 - 1.0
1,309,875 + 0.0