Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4075

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4074: 12442 - KOG0961 Predicted Zn2+-dependent endopeptidase, insulinase superfamily, at 1292721 to 1296857 12442 mRNA_4075: 12443 - Hypothetical Protein, at 1297147 to 1298186 12443 mRNA_4076: 12444 - K12486 SMAP stromal membrane-associated protein, at 1298752 to 1301700 12444

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,296,170 - 12442 mRNA_4074 0.83 1.1
1,296,459 + 1.0
1,296,673 - -0.7
1,296,930 - 1.0
1,297,619 - 12443 mRNA_4075 0.45 0.3
1,297,632 - 12443 mRNA_4075 0.47 -0.0
1,297,937 + 12443 mRNA_4075 0.76 0.3
1,298,068 - 12443 mRNA_4075 0.89 1.6
1,298,210 - 0.2
1,298,242 - 0.0
1,298,263 - -0.1
1,298,792 + 1.7
1,298,816 - 2.5
1,298,843 + -0.1
1,298,996 - 0.8
1,299,073 + 12444 mRNA_4076 0.11 -0.4
1,299,086 + 12444 mRNA_4076 0.11 -1.7
1,299,088 - 12444 mRNA_4076 0.11 0.6
1,299,160 + 12444 mRNA_4076 0.14 1.2