Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3948

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3947: 12315 - KOG1502 Flavonol reductase/cinnamoyl-CoA reductase, at 970867 to 972281 12315 mRNA_3948: 12316 - Hypothetical Protein, at 972401 to 974517 12316 mRNA_3949: 12317 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 974952 to 977086 12317

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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971,667 - 12315 mRNA_3947 0.57 1.7
971,677 + 12315 mRNA_3947 0.57 -0.6
972,120 + 12315 mRNA_3947 0.89 -0.5
972,262 + 1.4
972,457 + -0.9
972,651 - 12316 mRNA_3948 0.12 0.6
973,497 - 12316 mRNA_3948 0.52 -3.1
973,565 + 12316 mRNA_3948 0.55 -2.0
973,895 + 12316 mRNA_3948 0.71 -1.5
974,192 - 12316 mRNA_3948 0.85 0.0
974,229 - 12316 mRNA_3948 0.86 0.8
974,270 + 12316 mRNA_3948 0.88 -0.3
974,274 - 12316 mRNA_3948 0.88 -1.3
974,727 - -0.1
975,035 - 1.2
975,334 + 12317 mRNA_3949 0.18 -0.8
975,352 - 12317 mRNA_3949 0.19 0.5
975,384 + 12317 mRNA_3949 0.20 0.9
975,444 - 12317 mRNA_3949 0.23 -0.5
975,461 - 12317 mRNA_3949 0.24 -0.7
975,477 - 12317 mRNA_3949 0.25 1.9
975,479 + 12317 mRNA_3949 0.25 2.8