Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3876

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3875: 12243 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 802441 to 804314 12243 mRNA_3876: 12244 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 804740 to 806816 12244 mRNA_3877: 12245 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 807234 to 808789 12245

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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804,037 + 12243 mRNA_3875 0.85 2.3
804,051 - 12243 mRNA_3875 0.86 -0.2
804,177 + -0.6
804,190 + -0.1
804,323 - -0.4
804,326 - -0.9
804,334 + 0.3
804,335 + 0.2
804,344 + -0.1
804,489 + 0.3
804,750 + 1.8
804,759 - 0.8
805,179 - 12244 mRNA_3876 0.21 0.5
805,341 - 12244 mRNA_3876 0.29 -0.2
805,799 + 12244 mRNA_3876 0.51 -1.6
806,236 - 12244 mRNA_3876 0.72 2.7
806,239 - 12244 mRNA_3876 0.72 -1.5
806,284 - 12244 mRNA_3876 0.74 -0.9
806,517 - 12244 mRNA_3876 0.86 2.4
806,669 - -1.3
807,109 + -0.7