Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3861

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3860: 12228 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 763401 to 765833 12228 mRNA_3861: 12229 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 766288 to 767441 12229 mRNA_3862: 12230 - SUPERFAMILY--SSF52047, at 767659 to 769319 12230

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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765,311 - 12228 mRNA_3860 0.79 -0.2
765,342 - 12228 mRNA_3860 0.80 1.1
765,343 + 12228 mRNA_3860 0.80 2.2
765,361 + 12228 mRNA_3860 0.81 0.1
765,431 - 12228 mRNA_3860 0.83 0.2
765,576 - 12228 mRNA_3860 0.89 0.6
765,584 + 12228 mRNA_3860 0.90 1.2
765,729 + 1.5
765,857 + 0.7
766,046 + 0.4
766,177 - 1.0
766,316 - 0.4
766,319 + 0.4
766,425 - 12229 mRNA_3861 0.12 0.4
766,426 + 12229 mRNA_3861 0.12 -0.1
766,464 + 12229 mRNA_3861 0.15 1.1
766,485 - 12229 mRNA_3861 0.17 1.5
766,541 + 12229 mRNA_3861 0.22 1.0
766,633 + 12229 mRNA_3861 0.30 1.6
766,759 + 12229 mRNA_3861 0.41 1.9
766,782 + 12229 mRNA_3861 0.43 1.2
766,861 + 12229 mRNA_3861 0.50 -0.7
766,935 + 12229 mRNA_3861 0.56 0.6
766,936 + 12229 mRNA_3861 0.56 1.5
766,966 + 12229 mRNA_3861 0.59 0.0
767,016 - 12229 mRNA_3861 0.63 -1.2
767,317 - 12229 mRNA_3861 0.89 -1.7
767,320 - 12229 mRNA_3861 0.89 0.8
767,353 - 0.9
767,370 + -0.0
767,519 + -0.7
767,594 - -0.1
767,595 + 0.1
767,642 - 0.3
767,741 + 1.2
767,845 - 12230 mRNA_3862 0.11 -0.3
768,086 + 12230 mRNA_3862 0.26 -0.7
768,188 + 12230 mRNA_3862 0.32 1.7
768,218 + 12230 mRNA_3862 0.34 -0.4
768,416 + 12230 mRNA_3862 0.46 1.4