Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3803

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3802: 12170 - K01939 purA, ADSS adenylosuccinate synthase, at 611047 to 612951 12170 mRNA_3803: 12171 - Hypothetical Protein, at 613917 to 616021 12171 mRNA_3804: 12172 - Hypothetical Protein, at 616342 to 617222 12172

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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612,960 - 1.9
612,981 - 0.0
612,990 + 0.5
612,990 + -1.4
612,995 + -1.4
612,997 - -1.4
613,294 + -1.5
613,295 - -0.2
613,300 + 0.7
613,581 + -0.5
613,597 - -0.1
613,998 + -0.5
614,025 + -0.0
614,482 - 12171 mRNA_3803 0.27 -0.4
614,487 + 12171 mRNA_3803 0.27 0.5
614,630 + 12171 mRNA_3803 0.34 0.3
614,641 + 12171 mRNA_3803 0.34 -0.0
615,832 - 0.3
616,003 + -1.0
616,104 - 1.0
616,503 + 12172 mRNA_3804 0.18 -0.4
616,531 + 12172 mRNA_3804 0.21 -0.0
616,537 - 12172 mRNA_3804 0.22 -0.2
616,689 + 12172 mRNA_3804 0.39 1.0
616,689 + 12172 mRNA_3804 0.39 -0.1
616,689 + 12172 mRNA_3804 0.39 -0.0
616,691 - 12172 mRNA_3804 0.40 -1.0
616,816 + 12172 mRNA_3804 0.54 -0.3
616,846 - 12172 mRNA_3804 0.57 0.7
616,969 - 12172 mRNA_3804 0.71 0.9
616,977 + 12172 mRNA_3804 0.72 0.3
616,981 + 12172 mRNA_3804 0.73 -0.2
617,008 - 12172 mRNA_3804 0.76 1.8