Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3772

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3771: 12139 - K02866 RP-L10e, RPL10 large subunit ribosomal protein L10e, at 545294 to 546306 12139 mRNA_3772: 12140 - K17662 CBP3, UQCC cytochrome b pre-mRNA-processing protein 3, at 546453 to 547644 12140 mRNA_3773: 12141 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 547802 to 549606 12141

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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546,379 - -1.4
546,394 + -0.2
546,507 - 0.4
546,520 + -0.8
546,538 - 1.9
546,557 - 1.0
546,914 + 12140 mRNA_3772 0.39 0.3
547,417 - 12140 mRNA_3772 0.81 -0.9
547,426 + 12140 mRNA_3772 0.82 -0.5
547,850 - 0.1
548,035 - 12141 mRNA_3773 0.13 0.0
548,390 - 12141 mRNA_3773 0.33 -1.3