Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3668

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3667: 12035 - KOG3455 Predicted membrane protein, at 300155 to 301036 12035 mRNA_3668: 12036 - K08870 TWF twinfilin, at 301158 to 305676 12036 mRNA_3669: 12037 - KOG1756 Histone 2A, at 305841 to 306858 12037

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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300,959 - 1.1
300,961 + 0.5
300,966 - 0.9
301,096 - -0.6
301,258 - -0.9
301,258 - 1.0
301,268 + -0.2
301,281 + 1.3
301,694 - 12036 mRNA_3668 0.12 0.1
301,733 - 12036 mRNA_3668 0.13 1.6
302,281 - 12036 mRNA_3668 0.25 -1.3
302,991 + 12036 mRNA_3668 0.41 0.9
303,195 + 12036 mRNA_3668 0.45 2.0
303,353 + 12036 mRNA_3668 0.49 -0.0
303,476 - 12036 mRNA_3668 0.51 0.3
303,526 - 12036 mRNA_3668 0.52 -0.2
303,630 - 12036 mRNA_3668 0.55 1.2
304,078 + 12036 mRNA_3668 0.65 -0.3
304,222 - 12036 mRNA_3668 0.68 0.3
304,366 - 12036 mRNA_3668 0.71 -0.9
304,495 - 12036 mRNA_3668 0.74 0.5
304,780 - 12036 mRNA_3668 0.80 1.4
304,814 + 12036 mRNA_3668 0.81 0.2
304,949 - 12036 mRNA_3668 0.84 -0.2
305,238 + 1.2
305,496 + -0.1
306,422 - 12037 mRNA_3669 0.57 0.5