Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3633

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3633: 12001 - KOG1074 Transcriptional repressor SALM, at 211047 to 213295 12001 mRNA_3634: 12002 - KOG2456 Aldehyde dehydrogenase, at 213705 to 215567 12002

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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210,092 - -1.8
210,261 + -1.1
210,951 - -1.0
211,119 - 0.3
211,809 - 12001 mRNA_3633 0.34 -0.2
211,831 + 12001 mRNA_3633 0.35 -2.2
212,475 + 12001 mRNA_3633 0.63 0.9
212,502 + 12001 mRNA_3633 0.65 0.1
212,740 + 12001 mRNA_3633 0.75 1.1
212,828 + 12001 mRNA_3633 0.79 -0.4
213,027 - 12001 mRNA_3633 0.88 -0.1
213,304 - 0.9
213,430 - -1.1
213,771 + 0.6
214,018 - 12002 mRNA_3634 0.17 1.0
214,027 + 12002 mRNA_3634 0.17 -0.4
214,047 + 12002 mRNA_3634 0.18 1.8
214,070 + 12002 mRNA_3634 0.20 -1.8
214,266 + 12002 mRNA_3634 0.30 -1.3