Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3607

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3606: 11974 - HMMPfam-Tho complex subunit 7-PF05615, at 158142 to 159312 11974 mRNA_3607: 11975 - BLAST putative transmembrane protein [Rhizoctonia solani 123E], at 159428 to 160353 11975 mRNA_3608: 11976 - Hypothetical Protein, at 161019 to 162088 11976

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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158,573 - 11974 mRNA_3606 0.37 0.1
158,579 - 11974 mRNA_3606 0.37 -0.3
158,919 - 11974 mRNA_3606 0.66 1.4
159,068 - 11974 mRNA_3606 0.79 -2.2
159,341 - -0.1
159,349 - -0.3
159,350 + 1.9
159,385 + -0.3
159,619 - 11975 mRNA_3607 0.21 0.4
159,638 - 11975 mRNA_3607 0.23 -1.0
159,660 - 11975 mRNA_3607 0.25 -0.5
159,663 - 11975 mRNA_3607 0.25 1.0
159,930 - 11975 mRNA_3607 0.54 0.2
159,960 + 11975 mRNA_3607 0.57 0.6
160,202 + 11975 mRNA_3607 0.84 -0.3
160,222 + 11975 mRNA_3607 0.86 0.0
160,470 - -0.7
160,508 + 1.0
160,515 - 0.5
160,686 + -0.2
160,813 - 0.3
161,184 - 11976 mRNA_3608 0.15 0.1
161,232 + 11976 mRNA_3608 0.20 -0.1