Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3563

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3563: 11931 - Hypothetical Protein, at 61951 to 62967 11931 mRNA_3564: 11932 - Hypothetical Protein, at 63584 to 64390 11932

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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61,156 + 0.5
61,299 + 0.4
61,424 + 0.2
61,480 + 0.9
61,571 + 1.0
61,600 + 0.4
61,710 - -1.0
61,731 + 0.6
62,305 - 11931 mRNA_3563 0.35 0.7
62,307 - 11931 mRNA_3563 0.35 0.2
62,308 - 11931 mRNA_3563 0.35 2.7
62,309 + 11931 mRNA_3563 0.35 -0.7
62,367 + 11931 mRNA_3563 0.41 1.0
62,588 + 11931 mRNA_3563 0.63 0.2
62,601 + 11931 mRNA_3563 0.64 0.1
62,894 + -4.2
63,002 + 0.6
63,003 - 1.9
63,020 + 2.9
63,026 + 0.6
63,044 - 0.4
63,504 + 2.9
63,533 + -1.1
63,625 + -0.2
63,645 + 2.3
63,646 - -0.4
63,691 - 11932 mRNA_3564 0.13 0.3
63,696 + 11932 mRNA_3564 0.14 1.4
63,696 + 11932 mRNA_3564 0.14 -0.1
63,735 + 11932 mRNA_3564 0.19 0.4
63,744 + 11932 mRNA_3564 0.20 0.8
63,758 + 11932 mRNA_3564 0.22 -0.6
63,758 - 11932 mRNA_3564 0.22 0.3
63,778 - 11932 mRNA_3564 0.24 1.1
63,780 - 11932 mRNA_3564 0.24 -1.0
63,795 + 11932 mRNA_3564 0.26 -0.0
63,796 - 11932 mRNA_3564 0.26 2.1
63,809 - 11932 mRNA_3564 0.28 1.4
63,817 + 11932 mRNA_3564 0.29 -0.2
63,826 + 11932 mRNA_3564 0.30 0.9
63,842 - 11932 mRNA_3564 0.32 0.5
63,850 + 11932 mRNA_3564 0.33 0.4
63,914 - 11932 mRNA_3564 0.41 0.9