Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3537

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3537: 11905 - Hypothetical Protein, at 102 to 917 11905

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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2 + 0.3
2 + 1.2
2 + 1.1
2 + -0.6
2 + 0.3
2 + 0.4
2 + -1.5
14 + 0.2
26 + -0.7
36 + -0.3
39 + 1.8
42 - 0.8
50 + 0.6
50 + 0.8
50 + -0.9
53 - 1.3
57 + 0.1
59 - 0.7
103 + 0.5
104 + 0.4
112 + -0.3
117 - 0.3
120 - -1.3
140 - 0.2
141 + 0.1
146 + 1.6
150 + 1.4
199 - 11905 mRNA_3537 0.12 0.8
200 + 11905 mRNA_3537 0.12 -0.1
200 - 11905 mRNA_3537 0.12 0.3
200 - 11905 mRNA_3537 0.12 1.1
200 - 11905 mRNA_3537 0.12 -0.5
201 - 11905 mRNA_3537 0.12 1.2
207 + 11905 mRNA_3537 0.13 0.5
207 + 11905 mRNA_3537 0.13 0.1
207 + 11905 mRNA_3537 0.13 -1.4
209 + 11905 mRNA_3537 0.13 0.5
210 + 11905 mRNA_3537 0.13 0.1
213 + 11905 mRNA_3537 0.14 0.0
213 + 11905 mRNA_3537 0.14 1.7
214 + 11905 mRNA_3537 0.14 -0.9
214 + 11905 mRNA_3537 0.14 0.3
218 + 11905 mRNA_3537 0.14 0.4
221 + 11905 mRNA_3537 0.15 -0.8
222 + 11905 mRNA_3537 0.15 0.1
222 + 11905 mRNA_3537 0.15 0.5
222 + 11905 mRNA_3537 0.15 0.3
223 - 11905 mRNA_3537 0.15 0.1
225 - 11905 mRNA_3537 0.15 -0.6
227 - 11905 mRNA_3537 0.15 1.0
227 + 11905 mRNA_3537 0.15 1.3
230 + 11905 mRNA_3537 0.16 0.9
230 + 11905 mRNA_3537 0.16 0.7
246 - 11905 mRNA_3537 0.18 1.2
246 - 11905 mRNA_3537 0.18 0.1
251 + 11905 mRNA_3537 0.18 1.7
252 + 11905 mRNA_3537 0.18 -0.4
260 + 11905 mRNA_3537 0.19 0.3
262 + 11905 mRNA_3537 0.20 -1.1
265 - 11905 mRNA_3537 0.20 0.2
272 - 11905 mRNA_3537 0.21 0.2
274 + 11905 mRNA_3537 0.21 0.7
325 - 11905 mRNA_3537 0.27 1.1
326 - 11905 mRNA_3537 0.27 1.0
341 + 11905 mRNA_3537 0.29 -0.2
359 + 11905 mRNA_3537 0.31 0.5
362 + 11905 mRNA_3537 0.32 0.4
367 - 11905 mRNA_3537 0.32 0.2
368 + 11905 mRNA_3537 0.33 0.3
368 + 11905 mRNA_3537 0.33 -0.0
368 + 11905 mRNA_3537 0.33 0.7
373 + 11905 mRNA_3537 0.33 1.3
373 - 11905 mRNA_3537 0.33 0.9
373 - 11905 mRNA_3537 0.33 0.0
379 + 11905 mRNA_3537 0.34 -0.0
380 + 11905 mRNA_3537 0.34 -0.6
417 + 11905 mRNA_3537 0.39 0.8
452 + 11905 mRNA_3537 0.43 0.4
472 + 11905 mRNA_3537 0.45 2.0
484 + 11905 mRNA_3537 0.47 0.1
489 - 11905 mRNA_3537 0.47 0.7
503 - 11905 mRNA_3537 0.49 -0.5
511 + 11905 mRNA_3537 0.50 1.5
518 + 11905 mRNA_3537 0.51 2.5
523 + 11905 mRNA_3537 0.52 -0.1
533 + 11905 mRNA_3537 0.53 -0.2
539 + 11905 mRNA_3537 0.54 -0.3
550 + 11905 mRNA_3537 0.55 0.4
579 + 11905 mRNA_3537 0.58 0.1
638 - 11905 mRNA_3537 0.66 -0.5
640 - 11905 mRNA_3537 0.66 0.6
657 + 11905 mRNA_3537 0.68 -0.0
762 - 11905 mRNA_3537 0.81 -2.3
768 + 11905 mRNA_3537 0.82 -1.6
791 - 11905 mRNA_3537 0.84 0.1
801 + 11905 mRNA_3537 0.86 1.5
804 + 11905 mRNA_3537 0.86 -2.0
822 + 11905 mRNA_3537 0.88 1.8
827 + 11905 mRNA_3537 0.89 0.5
842 + -0.4
842 + 0.5
845 - 1.6
962 - -1.0
990 + 0.8
1,074 + 1.1
1,080 - -1.3
1,107 + -0.3
1,110 - -0.3
1,123 + 0.6
1,143 + -1.1
1,256 - 0.5
1,278 + 0.0
1,336 + 0.2
1,371 - 0.5
1,404 - 0.3
1,429 + 0.2
1,450 + 1.8
1,528 + -0.4
1,550 + 1.5
1,647 - 0.0
1,653 + -2.2
1,661 - 1.5
1,663 + -0.1
1,719 + 1.8
1,720 + -0.1
1,760 + -1.2
1,814 - 0.5
1,902 - 2.1