Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3529

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3528: 11896 - Hypothetical Protein, at 316787 to 317613 11896 mRNA_3529: 11897 - Hypothetical Protein, at 318059 to 319264 11897 mRNA_3530: 11898 - K14007 SEC24 protein transport protein SEC24, at 319879 to 322720 11898

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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317,420 - 11896 mRNA_3528 0.77 0.4
317,567 + 0.1
317,582 - 1.0
317,705 + 1.8
317,882 + 0.7
317,926 - 1.2
318,042 + -1.0
318,196 + 11897 mRNA_3529 0.11 1.4
318,207 - 11897 mRNA_3529 0.12 -0.0
318,312 - 11897 mRNA_3529 0.21 -0.4
318,471 - 11897 mRNA_3529 0.34 0.7
318,514 - 11897 mRNA_3529 0.38 0.7
318,594 - 11897 mRNA_3529 0.44 -0.5
318,646 - 11897 mRNA_3529 0.49 2.0
318,654 + 11897 mRNA_3529 0.49 -0.4
318,715 + 11897 mRNA_3529 0.54 1.5
318,773 - 11897 mRNA_3529 0.59 0.1
318,892 - 11897 mRNA_3529 0.69 -0.0
318,900 + 11897 mRNA_3529 0.70 -0.8
318,970 + 11897 mRNA_3529 0.76 1.5
319,000 + 11897 mRNA_3529 0.78 2.2
319,041 + 11897 mRNA_3529 0.81 0.2
319,076 + 11897 mRNA_3529 0.84 0.9
319,201 - -0.0
319,216 + 0.8
319,224 - -0.5
319,308 + -0.9
319,352 + -0.3
319,377 + -0.1
319,519 - -1.2
319,533 + 0.5
319,534 - 2.3
319,536 - 1.9
319,537 + -0.0
319,541 - 1.8
319,546 + 0.5
319,728 - -0.2
319,730 + -0.2
319,864 - 0.7
319,875 + -0.3