Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3528

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3527: 11895 - K08658 RCE1, FACE2 prenyl protein peptidase, at 315026 to 316520 11895 mRNA_3528: 11896 - Hypothetical Protein, at 316787 to 317613 11896 mRNA_3529: 11897 - Hypothetical Protein, at 318059 to 319264 11897

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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315,826 + 11895 mRNA_3527 0.54 0.9
316,395 + 0.6
316,409 - -1.2
316,653 + 0.1
316,683 + 0.7
316,690 + 1.1
316,694 + 2.4
316,706 + 1.5
316,803 + -0.2
316,817 - -0.3
316,841 + 0.4
316,876 + 11896 mRNA_3528 0.11 1.6
316,896 + 11896 mRNA_3528 0.13 0.2
316,916 - 11896 mRNA_3528 0.16 2.0
316,996 + 11896 mRNA_3528 0.25 0.0
317,420 - 11896 mRNA_3528 0.77 0.4
317,567 + 0.1
317,582 - 1.0
317,705 + 1.8
317,882 + 0.7
317,926 - 1.2
318,042 + -1.0
318,196 + 11897 mRNA_3529 0.11 1.4
318,207 - 11897 mRNA_3529 0.12 -0.0
318,312 - 11897 mRNA_3529 0.21 -0.4
318,471 - 11897 mRNA_3529 0.34 0.7
318,514 - 11897 mRNA_3529 0.38 0.7
318,594 - 11897 mRNA_3529 0.44 -0.5