Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3477

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3476: 11844 - K01915 glnA, GLUL glutamine synthetase, at 198470 to 200585 11844 mRNA_3477: 11845 - K07088 K07088 uncharacterized protein, at 201579 to 204327 11845 mRNA_3478: 11846 - SUPERFAMILY--SSF56112, at 204722 to 206830 11846

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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200,624 + -0.5
200,627 - -1.8
200,630 + 1.8
200,631 - 0.2
200,637 + 0.6
200,648 - 0.7
200,648 + 0.3
200,650 + -0.1
200,702 - -0.0
200,703 + -0.8
200,705 - 0.7
200,707 - -0.4
200,707 - 0.9
200,709 + 1.8
200,709 - 0.4
200,717 - 0.5
200,727 + 0.5
200,734 - 0.1
200,739 - -0.2
200,779 + 0.1
200,846 - 0.1
200,847 - 0.9
200,865 - 0.7
200,868 + 0.1
200,871 + 0.3
200,874 + 0.0
200,882 + 1.4
200,890 - 0.5
201,008 + 0.9
201,022 + -0.4
201,026 + 0.1
201,032 - 0.2
201,177 - 0.4
201,178 + -0.1
201,208 + -0.2
201,429 - -0.8
201,432 + -1.4
201,602 + 0.1
201,884 - 11845 mRNA_3477 0.11 -0.7
202,630 + 11845 mRNA_3477 0.38 -0.6
203,158 + 11845 mRNA_3477 0.57 -0.0
203,850 + 11845 mRNA_3477 0.83 -0.8
204,086 + 2.9
204,093 + 0.5
204,275 - -0.1
204,292 + 1.4
204,411 - -1.6
204,562 + 1.5
204,863 - 0.1