Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3445

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3444: 11812 - Hypothetical Protein, at 118476 to 119519 11812 mRNA_3445: 11813 - HMMPfam-BRO1-like domain-PF03097,ProSiteProfiles-BRO1 domain profile.-PS51180,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,SMART-BRO1-like domain-SM01041, at 120363 to 121884 11813 mRNA_3446: 11814 - K07393 ECM4 putative glutathione S-transferase, at 122538 to 123846 11814

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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119,578 - 2.0
119,579 + 0.2
119,601 + 0.1
119,736 + 1.1
119,904 - 0.9
120,034 - -0.7
120,892 + 11813 mRNA_3445 0.35 0.9
120,934 - 11813 mRNA_3445 0.38 0.2
121,217 - 11813 mRNA_3445 0.56 0.7
121,632 + 11813 mRNA_3445 0.83 0.3
121,634 - 11813 mRNA_3445 0.84 3.2
121,636 - 11813 mRNA_3445 0.84 0.3
122,049 - 0.9
122,071 - 0.4
122,231 - -1.2
122,238 + 2.3
122,238 - -0.5
122,238 - 2.0
122,239 + 0.5
122,240 + 1.3
122,245 + -0.4
122,381 - -0.7
122,514 + 0.0
122,526 + -1.3
122,669 - 11814 mRNA_3446 0.10 0.3
122,861 - 11814 mRNA_3446 0.25 0.5