Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3431

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3430: 11798 - Hypothetical Protein, at 81829 to 82404 11798 mRNA_3431: 11799 - K11155 DGAT1 diacylglycerol O-acyltransferase 1, at 82671 to 85458 11799

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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82,311 + 11798 mRNA_3430 0.84 1.5
82,319 - 11798 mRNA_3430 0.85 1.2
82,322 + 11798 mRNA_3430 0.86 -0.0
82,326 - 11798 mRNA_3430 0.86 1.4
82,328 - 11798 mRNA_3430 0.87 0.1
82,331 - 11798 mRNA_3430 0.87 0.8
82,348 - -1.2
82,360 + -0.8
82,373 + -0.0
82,491 - 0.6
82,496 + -0.4
82,499 + 1.2
82,509 + -0.2
82,513 + 1.2
82,513 - 2.0
82,568 - 2.7
82,583 + 0.1
82,593 - 1.3
82,594 - -0.6
82,610 - -0.2
82,633 + 0.5
82,638 + -1.2
82,645 + 2.4
82,652 - 0.7
82,677 + -0.3
82,760 - -1.4
82,781 + 1.0
82,784 - 0.6
82,784 + 0.1
82,785 + -0.6
82,812 - 1.0
83,247 + 11799 mRNA_3431 0.21 -1.8
83,530 - 11799 mRNA_3431 0.31 -2.2
83,677 + 11799 mRNA_3431 0.36 0.9
83,965 + 11799 mRNA_3431 0.46 2.7
84,202 + 11799 mRNA_3431 0.55 0.7
84,693 + 11799 mRNA_3431 0.73 1.2
84,832 + 11799 mRNA_3431 0.78 -0.1
84,836 - 11799 mRNA_3431 0.78 0.9
84,959 + 11799 mRNA_3431 0.82 0.3
85,139 + 11799 mRNA_3431 0.89 0.4
85,527 - 0.2
85,532 - -0.3
85,534 + 0.4
85,537 - 1.7
85,552 - 0.4
85,566 + -1.1
85,590 - 1.5
85,677 - -0.7
85,680 - 1.1
85,713 + 0.5
85,728 + -0.2
85,756 - -0.5
85,937 - 0.5
85,979 - 1.6
85,999 - 1.1
86,004 + 0.9
86,133 + -0.6
86,253 + 0.0
86,256 - 0.4
86,280 + 0.5
86,285 - 1.0