Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3410

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3409: 11777 - K05658 ABCB1, CD243 ATP-binding cassette, subfamily B (MDR/TAP), member 1, at 20794 to 26649 11777 mRNA_3410: 11778 - BLAST allergen [Malassezia sympodialis ATCC 42132], at 27190 to 28187 11778

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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26,269 + 1.2
26,289 + 0.3
26,293 + 0.1
26,306 + -0.6
26,435 - 1.9
26,460 + -0.8
26,543 + 0.8
26,559 - 0.4
26,572 + -1.9
26,589 - 0.4
26,590 + 0.2
26,596 + -0.5
26,602 + -0.1
26,621 - -0.2
26,640 - -0.6
26,645 + -0.3
26,647 - -0.1
26,654 + 0.8
26,654 - 0.3
26,666 - 1.4
26,915 + 1.6
26,941 - 0.1
26,942 - 0.1
26,947 + -0.6
26,957 + -1.3
27,048 + -0.3
27,130 + 0.3
27,371 + 11778 mRNA_3410 0.18 -1.1
27,378 + 11778 mRNA_3410 0.19 0.6
27,394 - 11778 mRNA_3410 0.20 -0.5
27,403 + 11778 mRNA_3410 0.21 -0.8
27,518 - 11778 mRNA_3410 0.33 0.1
27,574 - 11778 mRNA_3410 0.38 -1.3
28,109 + 0.2
28,416 + 1.3
28,491 - -1.0
28,493 + -0.5
28,718 + 0.8
28,730 + -0.9
28,738 + 3.1
28,753 - -1.0
28,771 + -0.6
28,771 + 1.7
28,786 - 0.8
28,787 + 0.6
28,789 + 1.3
28,798 + 2.0
28,813 - 0.6
28,832 + 0.5