Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3385

Experiments: 40 hrs Low Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3385: 11753 - HMMPfam-Gamma interferon inducible lysosomal thiol reductase (GILT)-PF03227, at 554455 to 555770 11753 mRNA_3386: 11754 - K05756 ARPC3 actin related protein 2/3 complex, subunit 3, at 556119 to 557419 11754

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
remove
553,560 + 0.2
554,046 + 0.3
554,060 + 0.2
554,186 + -0.3
554,333 + 0.8
554,339 - 0.5
554,345 - -0.5
554,345 + 1.0
554,346 + -0.2
554,347 + 1.2
554,351 - -0.4
554,361 + 1.2
554,362 + 0.1
554,369 - -1.4
554,389 - 0.8
554,390 + -0.0
554,400 - 1.6
554,632 - 11753 mRNA_3385 0.13 0.5
554,644 + 11753 mRNA_3385 0.14 0.1
554,673 - 11753 mRNA_3385 0.17 1.1
554,789 - 11753 mRNA_3385 0.25 2.4
554,793 - 11753 mRNA_3385 0.26 0.3
554,938 + 11753 mRNA_3385 0.37 0.2
554,941 - 11753 mRNA_3385 0.37 0.4
555,086 + 11753 mRNA_3385 0.48 1.0
555,302 - 11753 mRNA_3385 0.64 1.1
555,385 + 11753 mRNA_3385 0.71 0.7
555,632 + 11753 mRNA_3385 0.89 -0.1
555,812 + -0.3
555,813 - -0.5
555,958 - -0.3
555,965 + 1.5
555,967 + 0.6
555,975 + -0.1
555,976 - -0.1
555,989 + 0.1
556,011 - -0.7