Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3361

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3360: 11728 - KOG4836 Uncharacterized conserved protein, at 493196 to 494520 11728 mRNA_3361: 11729 - K11247 SH3GL endophilin-A, at 494941 to 495602 11729 mRNA_3362: 11730 - BLAST vacuolar assembly/sorting protein DID2 [Moesziomyces ..., at 495992 to 499759 11730

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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494,204 - 11728 mRNA_3360 0.76 0.5
494,214 - 11728 mRNA_3360 0.77 0.4
494,245 - 11728 mRNA_3360 0.79 1.8
494,269 - 11728 mRNA_3360 0.81 -0.2
494,398 - 1.1
494,407 - 1.5
494,414 - -0.3
494,534 + 0.5
494,547 - 0.1
494,572 + 0.9
494,846 + -0.3
495,112 - 11729 mRNA_3361 0.26 -0.2
495,158 + 11729 mRNA_3361 0.33 -0.5
495,239 - 11729 mRNA_3361 0.45 -0.0
495,284 + 11729 mRNA_3361 0.52 -0.4
495,868 - -1.4
495,894 - -0.0
495,999 + 0.4
496,002 - 0.5
496,156 + -0.3
496,156 - 0.5
496,185 - 0.2
496,295 - 0.3
496,487 - 11730 mRNA_3362 0.13 1.9
496,487 - 11730 mRNA_3362 0.13 -0.2