Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3321

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3320: 11688 - KOG2493 Na+/Pi symporter, at 389310 to 390792 11688 mRNA_3321: 11689 - Hypothetical Protein, at 391300 to 392689 11689

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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390,434 - 11688 mRNA_3320 0.76 1.5
390,460 + 11688 mRNA_3320 0.78 0.4
390,489 + 11688 mRNA_3320 0.80 0.2
390,634 + 11688 mRNA_3320 0.89 0.6
390,868 - 1.5
391,158 - 0.5
391,320 - 2.6
391,526 - 11689 mRNA_3321 0.16 1.5
391,668 - 11689 mRNA_3321 0.26 1.6
391,789 + 11689 mRNA_3321 0.35 -0.6
392,040 - 11689 mRNA_3321 0.53 2.1
392,041 + 11689 mRNA_3321 0.53 -0.2
392,241 - 11689 mRNA_3321 0.68 -0.5
392,356 + 11689 mRNA_3321 0.76 -1.2
392,453 + 11689 mRNA_3321 0.83 -0.2
392,473 + 11689 mRNA_3321 0.84 0.4
392,541 - 11689 mRNA_3321 0.89 1.0
393,363 - 0.9
393,456 - 1.3
393,459 + 0.5
393,459 + -1.0
393,462 - 0.0
393,629 - -1.0
393,634 + 2.7
393,641 - 1.8