Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3301

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3300: 11668 - HMMPfam-Amidohydrolase-PF13147,SUPERFAMILY--SSF51338,SUPERFAMILY--SSF51556, at 335794 to 339454 11668 mRNA_3301: 11669 - K08197 ARN MFS transporter, SIT family, siderophore-iron-H+ symporter, at 339708 to 341858 11669

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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338,744 + 11668 mRNA_3300 0.81 -0.1
338,907 + 11668 mRNA_3300 0.85 0.5
339,030 - 11668 mRNA_3300 0.88 -0.0
339,037 + 11668 mRNA_3300 0.89 1.0
339,178 - -0.4
339,189 - -0.0
339,204 + 0.6
339,208 - -0.6
339,215 + 0.5
339,331 + 0.6
339,338 + 0.0
339,350 + 1.0
339,362 + -0.3
339,416 + -0.3
339,484 - -0.6
339,513 + 1.8
339,521 - 0.6
339,533 + 0.2
339,539 - 2.3
339,550 + -1.0
339,554 + 0.5
339,557 + 2.2
339,648 + 0.5
339,649 + 0.0
339,659 - -1.4
339,670 - 0.3
339,676 + -1.5
339,872 + 0.7
339,891 - 1.2
339,909 + -0.5
339,927 + 11669 mRNA_3301 0.10 0.5
339,956 - 11669 mRNA_3301 0.12 0.1
339,971 - 11669 mRNA_3301 0.12 1.2
340,046 - 11669 mRNA_3301 0.16 1.4
340,096 + 11669 mRNA_3301 0.18 1.8
340,215 - 11669 mRNA_3301 0.24 -0.7
340,350 + 11669 mRNA_3301 0.30 1.7
340,490 - 11669 mRNA_3301 0.36 1.1
340,724 + 11669 mRNA_3301 0.47 0.7
340,859 - 11669 mRNA_3301 0.54 2.3
340,947 + 11669 mRNA_3301 0.58 -0.5
340,958 + 11669 mRNA_3301 0.58 1.4
340,985 + 11669 mRNA_3301 0.59 -0.1
341,001 + 11669 mRNA_3301 0.60 1.0
341,029 - 11669 mRNA_3301 0.61 0.7
341,032 + 11669 mRNA_3301 0.62 2.6
341,114 - 11669 mRNA_3301 0.65 -0.6
341,136 - 11669 mRNA_3301 0.66 -0.2
341,419 + 11669 mRNA_3301 0.80 2.1
341,462 + 11669 mRNA_3301 0.82 0.5
341,701 + -2.9
341,705 + 1.4
341,820 - 1.0
341,851 - 1.4
341,853 + -0.1
341,880 - 0.3
341,898 - -0.5
341,915 - 0.1
342,026 + -0.3
342,032 + 0.6
342,052 + 0.7
342,059 - 1.1
342,059 - -1.1
342,060 + -2.6
342,064 + -0.2
342,066 + -0.6
342,068 - 1.3
342,069 - -0.3
342,071 + 1.0
342,074 - -0.0
342,074 - 1.5
342,077 - -0.9
342,081 - 0.0
342,089 + -0.1
342,095 + 0.1
342,099 + -0.3
342,101 - 0.5
342,108 + 0.2
342,116 - 0.2
342,117 - -0.5
342,149 - 0.2
342,157 + -0.0
342,165 + -0.1
342,166 + 1.2
342,176 - -1.9
342,179 - 0.6
342,193 - 1.1
342,201 + -0.1
342,205 + -0.2
342,206 + 1.2
342,210 - -0.2
342,215 + 1.4
342,218 - 1.2
342,219 + 0.8
342,231 + 0.5
342,232 + 0.7
342,268 + -0.6
342,271 + -0.0
342,291 - 0.5
342,310 + 1.5
342,310 + -0.2
342,312 + 0.5
342,328 + 1.1
342,336 - 0.9
342,340 - 0.5
342,384 + 0.8
342,414 + 1.9
342,421 - -0.1
342,423 - 0.1
342,440 - 2.1
342,446 - 1.2
342,463 - -0.3
342,563 + -0.7
342,588 - -0.7
342,704 - 0.4
342,713 + -0.5
342,768 + 0.2