Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3282

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3281: 11649 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 282571 to 284691 11649 mRNA_3282: 11650 - KOG0023 Alcohol dehydrogenase, class V, at 285167 to 286436 11650 mRNA_3283: 11651 - K20224 IPO9, RANBP9 importin-9, at 287035 to 291052 11651

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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284,621 + 0.6
284,733 - 0.4
284,779 - 1.6
284,938 + 0.2
285,041 + 2.1
285,052 + 2.2
285,471 - 11650 mRNA_3282 0.24 0.6
285,491 - 11650 mRNA_3282 0.26 -0.1
285,608 - 11650 mRNA_3282 0.35 -0.5
285,776 + 11650 mRNA_3282 0.48 -1.3
285,777 + 11650 mRNA_3282 0.48 -0.2
286,119 - 11650 mRNA_3282 0.75 -1.4
286,948 + 0.0
286,962 - -0.1
286,978 + -1.2
286,980 + 0.9
287,260 - 0.8
287,409 - 0.5
287,425 + 2.3