Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3241

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3240: 11608 - Hypothetical Protein, at 191163 to 192030 11608 mRNA_3241: 11609 - SUPERFAMILY--SSF52047, at 192497 to 194768 11609 mRNA_3242: 11610 - K01814 hisA phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, at 194883 to 196226 11610

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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191,674 + 11608 mRNA_3240 0.59 0.2
191,677 + 11608 mRNA_3240 0.59 -0.4
191,714 + 11608 mRNA_3240 0.63 -0.1
191,861 + 11608 mRNA_3240 0.80 1.1
192,038 + -0.3
192,263 + 0.0
192,318 - 1.4
192,446 - -0.2
192,455 - 1.3
192,472 + -0.9
192,723 + -2.6
192,903 - 11609 mRNA_3241 0.18 0.2
193,455 + 11609 mRNA_3241 0.42 0.2
193,504 - 11609 mRNA_3241 0.44 1.3
193,581 - 11609 mRNA_3241 0.48 -0.0
193,772 - 11609 mRNA_3241 0.56 2.3
193,777 - 11609 mRNA_3241 0.56 -1.0
193,808 + 11609 mRNA_3241 0.58 0.4
193,933 - 11609 mRNA_3241 0.63 2.4
193,955 + 11609 mRNA_3241 0.64 0.3
193,957 - 11609 mRNA_3241 0.64 -2.6
193,961 + 11609 mRNA_3241 0.64 1.2
194,211 + 11609 mRNA_3241 0.75 0.2
194,459 + 11609 mRNA_3241 0.86 0.5
194,509 - 11609 mRNA_3241 0.89 0.1