Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3235

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3235: 11603 - Hypothetical Protein, at 170278 to 173457 11603 mRNA_3236: 11604 - K01755 argH, ASL argininosuccinate lyase, at 173698 to 175795 11604

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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169,622 + 1.8
169,635 + -0.1
169,873 - -0.0
170,012 + -0.0
170,072 + 0.5
170,135 - -0.5
170,183 + 0.4
170,187 + 0.5
170,188 - 0.0
170,190 - 0.5
170,193 + -0.5
170,197 + 1.5
170,200 - 0.3
170,216 - 0.8
170,220 + -0.6
170,356 + -0.0
170,476 + -0.4
170,616 + 11603 mRNA_3235 0.11 1.9
170,744 + 11603 mRNA_3235 0.15 2.5
170,770 - 11603 mRNA_3235 0.15 0.4
170,800 + 11603 mRNA_3235 0.16 -0.0
170,894 + 11603 mRNA_3235 0.19 0.2
170,954 - 11603 mRNA_3235 0.21 -1.4
171,132 + 11603 mRNA_3235 0.27 0.5
171,206 + 11603 mRNA_3235 0.29 0.2
171,473 - 11603 mRNA_3235 0.38 1.5
171,491 + 11603 mRNA_3235 0.38 -0.2
171,495 - 11603 mRNA_3235 0.38 0.2
171,538 + 11603 mRNA_3235 0.40 -0.6
171,574 - 11603 mRNA_3235 0.41 -0.0
171,842 - 11603 mRNA_3235 0.49 -0.5
172,017 + 11603 mRNA_3235 0.55 0.9
172,218 + 11603 mRNA_3235 0.61 -2.6
172,268 - 11603 mRNA_3235 0.63 1.2
172,556 + 11603 mRNA_3235 0.72 -2.0
172,556 + 11603 mRNA_3235 0.72 1.0
172,724 + 11603 mRNA_3235 0.77 0.2
172,993 - 11603 mRNA_3235 0.85 1.7
173,184 + -0.7
173,847 + -1.3
173,892 - -1.3
174,169 - 11604 mRNA_3236 0.22 -4.4