Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3220

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3219: 11587 - HMMPfam-RNase H-PF00075,ProSiteProfiles-RNase H domain profile.-PS50879,SUPERFAMILY--SSF53098, at 125577 to 131824 11587 mRNA_3220: 11588 - KOG0686 COP9 signalosome, subunit CSN1, at 132017 to 133130 11588

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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131,128 - 11587 mRNA_3219 0.89 0.4
131,459 - 1.2
131,602 - 1.5
131,964 + 1.3
132,026 - 0.5
132,346 - 11588 mRNA_3220 0.30 0.2
132,384 - 11588 mRNA_3220 0.33 0.7
132,395 - 11588 mRNA_3220 0.34 -1.0
133,039 + -2.1
133,203 - -0.2
133,682 + -1.8
133,888 - 0.1