Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3218

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3218: 11586 - PRINTS-Proline rich extensin signature-PR01217, at 118796 to 120170 11586

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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117,804 - -0.6
118,254 - 2.0
118,273 - 1.1
118,278 - -1.6
118,298 + -1.3
118,299 - 1.0
118,438 + -1.6
118,443 + -0.7
118,448 + 2.2
118,450 + 0.3
118,453 + 0.4
118,584 + -0.3
118,630 - 1.4
118,637 + 1.4
118,796 + 0.2
118,815 - 1.3
118,829 - 0.7
118,848 - -0.9
118,856 - -1.1
118,857 - 0.6
118,863 - 0.0
118,871 + 1.3
118,888 + 1.0
118,890 + 1.0
118,891 - -0.7
118,914 + 0.0
118,925 + 0.9
118,926 - -0.2
118,926 - -0.1
118,930 - 1.0
118,935 - 11586 mRNA_3218 0.10 -0.6
118,936 + 11586 mRNA_3218 0.10 -1.3
118,936 - 11586 mRNA_3218 0.10 -1.0
118,943 - 11586 mRNA_3218 0.11 0.1
118,959 + 11586 mRNA_3218 0.12 0.2
119,003 + 11586 mRNA_3218 0.15 -0.3
119,080 - 11586 mRNA_3218 0.21 0.1
119,109 - 11586 mRNA_3218 0.23 -0.3
119,407 - 11586 mRNA_3218 0.44 1.5
119,449 - 11586 mRNA_3218 0.47 -0.9
119,459 + 11586 mRNA_3218 0.48 1.0
119,478 - 11586 mRNA_3218 0.50 -0.3
119,556 - 11586 mRNA_3218 0.55 1.6
119,558 - 11586 mRNA_3218 0.55 -0.0
119,572 + 11586 mRNA_3218 0.56 -0.3
119,575 - 11586 mRNA_3218 0.57 0.4
119,599 - 11586 mRNA_3218 0.58 -1.5
119,718 - 11586 mRNA_3218 0.67 2.0
119,756 + 11586 mRNA_3218 0.70 -0.9
119,922 - 11586 mRNA_3218 0.82 0.7
120,048 - 0.0
120,145 - -0.6
120,232 - -0.4
120,921 - -1.0