Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3137

Experiments: 40 hrs Low Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3136: 11504 - KOG2615 Permease of the major facilitator superfamily, at 401491 to 407249 11504 mRNA_3137: 11505 - SUPERFAMILY--SSF48208, at 407732 to 408630 11505 mRNA_3138: 11506 - K13106 BUD13, CWC26 pre-mRNA-splicing factor CWC26, at 408830 to 410030 11506

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
remove
406,739 - -0.4
406,752 + -1.1
406,758 - -0.4
406,978 - -2.9
406,979 - -1.3
406,981 - 0.3
407,027 - -0.0
407,148 + 0.7
407,294 - 1.3
407,315 + -0.1
407,451 + 0.5
407,529 + -0.4
407,554 - 0.1
407,601 - 1.8
407,652 + 0.9
407,760 + 1.4
407,796 + -0.3
407,807 - 2.1
407,871 + 11505 mRNA_3137 0.15 0.3
407,875 - 11505 mRNA_3137 0.16 1.7
407,932 + 11505 mRNA_3137 0.22 1.3
408,220 - 11505 mRNA_3137 0.54 0.6
408,266 + 11505 mRNA_3137 0.59 -0.7
408,267 - 11505 mRNA_3137 0.60 -0.6
408,311 - 11505 mRNA_3137 0.64 -0.4
408,357 - 11505 mRNA_3137 0.70 3.5
408,510 - 11505 mRNA_3137 0.87 -0.3
408,556 + -0.5
408,566 + -0.2
408,638 - 0.1
408,652 - 1.6
408,665 + -0.5
408,669 - -0.2
408,669 - 0.1
408,673 - 0.0
408,676 - 1.1
408,681 - -0.6
408,782 + 0.3
408,813 - -0.0
408,948 + -1.1
408,962 - 11506 mRNA_3138 0.11 0.4
408,971 + 11506 mRNA_3138 0.12 -0.2
408,971 - 11506 mRNA_3138 0.12 -0.1
408,976 - 11506 mRNA_3138 0.12 -0.2
409,061 - 11506 mRNA_3138 0.19 1.2
409,081 - 11506 mRNA_3138 0.21 0.1
409,105 - 11506 mRNA_3138 0.23 0.4
409,107 + 11506 mRNA_3138 0.23 -0.4
409,109 - 11506 mRNA_3138 0.23 1.1
409,134 + 11506 mRNA_3138 0.25 -1.5
409,418 + 11506 mRNA_3138 0.49 0.7
409,533 - 11506 mRNA_3138 0.59 -0.0