Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3098

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3097: 11465 - K00591 COQ3 polyprenyldihydroxybenzoate methyltransferase / 3-demethylubiquinol 3-O-methyltransferase, at 311599 to 312739 11465 mRNA_3098: 11466 - ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 312938 to 315396 11466 mRNA_3099: 11467 - Hypothetical Protein, at 315457 to 316238 11467

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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312,026 - 11465 mRNA_3097 0.37 0.3
312,032 + 11465 mRNA_3097 0.38 -2.0
312,136 + 11465 mRNA_3097 0.47 0.1
312,233 + 11465 mRNA_3097 0.56 2.2
312,462 + 11465 mRNA_3097 0.76 -1.0
312,462 + 11465 mRNA_3097 0.76 0.9
312,469 + 11465 mRNA_3097 0.76 0.3
312,472 - 11465 mRNA_3097 0.77 -0.3
312,597 - 11465 mRNA_3097 0.87 1.3
312,803 + 0.6
312,910 + 0.3
312,913 + 0.9
312,935 + -0.2
312,980 - 2.1
313,058 + 0.7
313,212 - 11466 mRNA_3098 0.11 0.1
313,214 + 11466 mRNA_3098 0.11 0.4
313,337 + 11466 mRNA_3098 0.16 -0.2
313,452 + 11466 mRNA_3098 0.21 2.0
313,466 + 11466 mRNA_3098 0.21 0.2
313,491 + 11466 mRNA_3098 0.22 1.3
313,680 + 11466 mRNA_3098 0.30 0.8
313,780 - 11466 mRNA_3098 0.34 2.4
314,080 + 11466 mRNA_3098 0.46 0.2
314,165 - 11466 mRNA_3098 0.50 0.1
314,190 - 11466 mRNA_3098 0.51 1.9
314,203 + 11466 mRNA_3098 0.51 -1.5
314,324 - 11466 mRNA_3098 0.56 0.0
314,347 + 11466 mRNA_3098 0.57 -1.0
314,361 - 11466 mRNA_3098 0.58 -0.6
314,372 - 11466 mRNA_3098 0.58 1.9
314,400 + 11466 mRNA_3098 0.59 0.7
314,496 + 11466 mRNA_3098 0.63 0.7
314,510 + 11466 mRNA_3098 0.64 -0.2
314,655 - 11466 mRNA_3098 0.70 1.6
314,854 + 11466 mRNA_3098 0.78 -0.7
314,886 + 11466 mRNA_3098 0.79 0.4
314,952 + 11466 mRNA_3098 0.82 1.1
315,276 - -0.9
315,441 - -2.3
315,450 + -0.8
315,500 - -0.3
315,704 + 11467 mRNA_3099 0.32 0.2
315,716 - 11467 mRNA_3099 0.33 1.9
315,721 - 11467 mRNA_3099 0.34 -0.1
315,728 + 11467 mRNA_3099 0.35 2.2
316,014 + 11467 mRNA_3099 0.71 0.0
316,303 - -1.0