Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2933

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2931: 11299 - K06676 BRRN1, BRN1, CAPH condensin complex subunit 2, at 579292 to 582332 11299 mRNA_2932: 11300 - Hypothetical Protein, at 582565 to 583032 11300 mRNA_2933: 11301 - Hypothetical Protein, at 583192 to 584593 11301 mRNA_2934: 11302 - Hypothetical Protein, at 585231 to 585949 11302

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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582,367 - 0.7
582,397 - 0.3
582,616 + 11300 mRNA_2932 0.11 -1.0
582,830 + 11300 mRNA_2932 0.57 0.7
582,831 - 11300 mRNA_2932 0.57 0.0
582,977 + 11300 mRNA_2932 0.88 0.7
583,075 - 0.1
583,110 - 0.8
583,117 - 0.1
583,120 - -1.7
583,398 + 11301 mRNA_2933 0.15 0.4
583,417 + 11301 mRNA_2933 0.16 -0.0
583,429 - 11301 mRNA_2933 0.17 0.3
583,523 + 11301 mRNA_2933 0.24 0.8
583,539 - 11301 mRNA_2933 0.25 -0.3
583,558 + 11301 mRNA_2933 0.26 0.3
583,667 + 11301 mRNA_2933 0.34 0.6
584,040 + 11301 mRNA_2933 0.60 -0.9
584,100 - 11301 mRNA_2933 0.65 -0.3
584,862 - -0.4
584,973 + -0.7
584,979 - -0.7
584,997 + -0.0
585,142 + -0.2
585,169 - -2.6
585,177 - 1.3
585,191 + -1.1
585,215 - 1.7
585,216 - 1.8
585,295 - -0.8
585,486 - 11302 mRNA_2934 0.35 1.1
585,489 + 11302 mRNA_2934 0.36 2.8